Package: cmfilter 0.9.5

cmfilter: Coordinate-Wise Mediation Filter

Functions to discover, plot, and select multiple mediators from an x -> M -> y linear system. This exploratory mediation analysis is performed using the Coordinate-wise Mediation Filter as introduced by Van Kesteren and Oberski (2019) <doi:10.1080/10705511.2019.1588124>.

Authors:Erik-Jan van Kesteren <[email protected]>

cmfilter_0.9.5.tar.gz
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cmfilter_0.9.5.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
cmfilter/json (API)

# Install 'cmfilter' in R:

install.packages('cmfilter', repos = c('https://vankesteren.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/vankesteren/cmfilter/issues

Uses libs:

openblas– Optimized BLAS
c++– GNU Standard C++ Library v3
openmp– GCC OpenMP (GOMP) support library

Datasets:

methylation - DNA Methylation, childhood trauma, and stress response

On CRAN:

openblas cpp openmp

2.30 score 4 stars 4 scripts 9 downloads 3 exports 8 dependencies

Last updated from:c789334c11. Checks:15 OK. Indexed: yes.

Target	Result	Time
linux-devel-arm64	OK	173
linux-devel-x86_64	OK	191
source / vignettes	OK	190
linux-release-arm64	OK	190
linux-release-x86_64	OK	136
macos-release-arm64	OK	225
macos-release-x86_64	OK	404
macos-oldrel-arm64	OK	201
macos-oldrel-x86_64	OK	464
windows-devel-arm64	OK	353
windows-devel-x86_64	OK	186
windows-release-arm64	OK	349
windows-release-x86_64	OK	140
windows-oldrel-x86_64	OK	140
wasm-release	OK	126

Exports:cmf generateMed setCutoff

Dependencies:lattice MASS Matrix pbapply Rcpp RcppArmadillo RcppProgress sparseMVN

Citation

Development and contributors

Readme and manuals

Help Manual

Help page	Topics
Combine the results of multiple cmf objects into one	+.cmf
Coordinate-wise Mediation Filter	cmf
Methods for cmf results lists	cmf-methods plot.cmf print.cmf screeplot.cmf summary.cmf
Generate a high-dimensional mediation dataset	generateMed
DNA Methylation, childhood trauma, and stress response	methylation
Set the cutoff for mediator selection	setCutoff
Add samples to existing cmf results object	update.cmf